dottup
EMBOSS Dottup
Use dottup (from EMBOSS) to compare two sets of sequences
Commands
- clean
- Remove all job data, not the Moa job itself, note that this must be implemented by the template.
- run
- Run dottup
Parameters
- input_dir_a
This set is compared to the sequences in input_dir_b.
type: directory
default: ``
optional: False
- input_dir_b
The set to compare against
type: directory
default: ``
optional: True
- input_extension
Extension of the dottup input files
type: string
default: fasta
optional: True
- wordsize
Wordsize used to discover similarities between sequences
type: integer
default: 8
optional: True
miscellaneous
- Backend
- gnumake
- Author
- Mark Fiers
- Creation date
- Wed Nov 10 07:56:48 2010
- Modification date
- Wed Nov 10 07:56:48 2010